Volume
@proceedings{BiCOB2019,
title = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340}}
Papers
@inproceedings{BiCOB2019:HPC_BLAST_Distributed_BLAST_for,
author = {Shane Sawyer and Mitchel Horton and Chad Burdyshaw and Glenn Brook and Bhanu Rekapalli},
title = {HPC-BLAST: Distributed BLAST for Modern HPC Clusters.},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {1--14},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/BxHL},
doi = {10.29007/qm7h}}
@inproceedings{BiCOB2019:gcn.MOPS_Accelerating_cn.MOPS_with,
author = {Mohammad Alkhamis and Amirali Baniasadi},
title = {gcn.MOPS: Accelerating cn.MOPS with GPU},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {15--26},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/t6bD},
doi = {10.29007/hb5r}}
@inproceedings{BiCOB2019:Identifying_DNA_Sequence_Motifs,
author = {Hassan Aldarwish and David Keller and Elena Harris},
title = {Identifying DNA Sequence Motifs of Pdx-1 and NeuroD1 Transcription Factors},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {27--35},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/W7XF},
doi = {10.29007/sfxr}}
@inproceedings{BiCOB2019:DALIGNER_Performance_Evaluation_on,
author = {Evaldo Costa and Gabriel Silva and Marcello Teixeira},
title = {DALIGNER Performance Evaluation on Intel Xeon Phi Architecture},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {36--47},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/Qdtd},
doi = {10.29007/j5cs}}
@inproceedings{BiCOB2019:An_Enrichment_Method_For,
author = {Yuan Liu and Yongchao Ma and Evan Salsman and Frank Manthey and Elias Elias and Xuehui Li and Changhui Yan},
title = {An Enrichment Method For Mapping Ambiguous Reads To Reference Genome For NGS Analysis},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {48--54},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/xH29},
doi = {10.29007/kw3c}}
@inproceedings{BiCOB2019:Comparison_of_Type_I,
author = {Zifeng Liang},
title = {Comparison of Type I Interferon Expression in Adult and Neonatal Mice during Respiratory Viral Infection},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {55--64},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/hSFC},
doi = {10.29007/ltkw}}
@inproceedings{BiCOB2019:Understand_Effective_Coverage_by,
author = {Shanshan Gao and Quang Tran and Vinhthuy Phan},
title = {Understand Effective Coverage by Mapped Reads using Genome Repeat Complexity},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {65--73},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/7cBK},
doi = {10.29007/krbn}}
@inproceedings{BiCOB2019:Polygraph_Data_Structure_for,
author = {Masaki Fujimoto and Cole Lyman and Mark Clement},
title = {The Polygraph: A Data Structure for Genome Alignment and Variation Detection},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {74--83},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/3rmK},
doi = {10.29007/txxd}}
@inproceedings{BiCOB2019:Improving_Classification_with_CNNs,
author = {Allison Rossetto and Wenjin Zhou},
title = {Improving Classification with CNNs using Wavelet Pooling with Nesterov-Accelerated Adam},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {84--93},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/6Mbb},
doi = {10.29007/9c5j}}
@inproceedings{BiCOB2019:Predicting_high_cost_patients_by,
author = {Isabella Eigner and Freimut Bodendorf and Nilmini Wickramasinghe},
title = {Predicting high-cost patients by Machine Learning: A case study in an Australian private hospital group},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {94--103},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/pZqS},
doi = {10.29007/jw6h}}
@inproceedings{BiCOB2019:New_Look_at_Codon,
author = {Gabriel Wright and Anabel Rodriguez and Patricia Clark and Scott Emrich},
title = {A New Look at Codon Usage and Protein Expression},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {104--112},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/z77C},
doi = {10.29007/d4tz}}
@inproceedings{BiCOB2019:Prediction_of_MoRFs_Based,
author = {Fang Chun and Yoshitaka Moriwaki and Caihong Li and Kentaro Shimizu},
title = {Prediction of MoRFs Based on n-gram Convolutional Neural Network},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {113--119},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/ZSlw},
doi = {10.29007/5k4z}}
@inproceedings{BiCOB2019:Robust_Fuzzy_Cluster_Ensemble,
author = {Yan Yan and Tin Nguyen and Bobby Bryant and Frederick C. Harris},
title = {Robust Fuzzy Cluster Ensemble on Cancer Gene Expression Data},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {120--128},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/TnB6},
doi = {10.29007/38sk}}
@inproceedings{BiCOB2019:SVM_Model_for_Candidate,
author = {Wageesha Rasanjana and Sandun Rajapaksa and Indika Perera and Dulani Meedeniya},
title = {A SVM Model for Candidate Y-chromosome Gene Discovery in Prostate Cancer},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {129--138},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/nV39},
doi = {10.29007/3nzw}}
@inproceedings{BiCOB2019:Colorectal_Cancer_Outcome_Prediction,
author = {Xingzhi Yue and Neofytos Dimitriou and Peter Caie and David Harrison and Ognjen Arandjelovic},
title = {Colorectal Cancer Outcome Prediction from H\textbackslash{}\&E Whole Slide Images using Machine Learning and Automatically Inferred Phenotype Profiles},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {139--149},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/M7NT},
doi = {10.29007/n912}}
@inproceedings{BiCOB2019:Petri_nets_and_ODE,
author = {Daria Kogut and Kaja Gutowska and Aleksandra Potera\{\textbackslash{}l\}a-Hejmo and Jaros\{\textbackslash{}l\}aw \textbackslash{}'Smieja and Dorota Formanowicz and Piotr Formanowicz},
title = {Petri nets and ODE as complementary tools in analysis of signaling pathways},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {150--160},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/kNR1},
doi = {10.29007/542h}}
@inproceedings{BiCOB2019:Equipping_Decoy_Generation_Algorithms,
author = {Ahmed Bin Zaman and Amarda Shehu},
title = {Equipping Decoy Generation Algorithms for Template-free Protein Structure Prediction with Maps of the Protein Conformation Space},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {161--169},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/Vcvg},
doi = {10.29007/j5p9}}
@inproceedings{BiCOB2019:Statistical_Analysis_of_GLCM,
author = {Abia Khan and Kavery Nivana Theethira Poonacha and Adrian Britt and Benjamin McSweeney and Nicolette Santos and Grace Donovan and Valerie Yurk and Tara Scully},
title = {Statistical Analysis of GLCM Texture Features and Microstructures in SEM Images of Crassostrea virginica Exposed to Atrazine},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {170--180},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/QZqg},
doi = {10.29007/59bk}}
@inproceedings{BiCOB2019:Connecting_Molecular_Energy_Landscape,
author = {Kazi Lutful Kabir and Nasrin Akhter and Amarda Shehu},
title = {Connecting Molecular Energy Landscape Analysis with Markov Model-based Analysis of Equilibrium Structural Dynamics},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {181--189},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/nv7M},
doi = {10.29007/tmgc}}
@inproceedings{BiCOB2019:Prediction_Of_Novel_Pirna,
author = {Tamer Aldwairi and Federico Hoffmann and Andy Perkins},
title = {Prediction Of Novel Pirna Rat Clusters Based On Mouse Pirna Clusters Using Downstream and Upstream Analysis},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
pages = {190--199},
year = {2019},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {https://easychair.org/publications/paper/h3mb},
doi = {10.29007/zwxg}}